Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945611.1_cds_XP_016488062.1_78735
CDS Infomation

[gene=LOC107808091] [db_xref=GeneID:107808091] [protein=glucosidase 2 subunit beta-like] [protein_id=XP_016488062.1] [location=join(2332..2417,2568..2713,3864..4013,4118..4213,6354..6593,7180..7370,8054..8149,9348..9663,9744..9848,9927..10028,10109..10166,10275..10343,10839..10926,11042..11103,11200..11251,11425..11487)] [gbkey=CDS]
Sequence

ATGGCGATTAAGGACATGTATGATGGGGCTAAGACTCGGGTCAGGACAGTAGAAGGCGAC
TCCGAGCATTTTCCGGTTGTGATGGGGTTGGAGGTTTGGCGACACACCCTTGAGTCTAAG
GGTTTTAAGCTGAGCAGGACGAAGACGAAATACATGGAGTGTAAATTTAGCGCTGAGCCG
GGGCAAGTGAGCGTGGATGTGAGGCTTGAATCACATGTCATCCCAAGTAAAGATGAAAAT
GATTTGTTTGTGATTGCAGATGAGAATTACTACAAGGGTTTGTCTTCGGGTGCTATAAAA
TGTAAAGATGGATCAAAGAAATTCACCAAGGATCAGCTCAATGATGATTTTTGTGACTGC
CCAGATGGTTCTGATGAGCCAGGGACCTCAGCATGCCCCAATGGAAAATTTTATTGCAAA
AATGCAGGACATATTCCTCTTTCAATATACTCGTCAAGGGTGAATGATCGCATTTGTGAT
TGCTGTGATGGGAGTGACGAGTATGATGGCAAAACCAAGTGCCCAAATACGTGCTGGGAG
GCTGGCAAAGTAGCTAGAGAAAAACTGAATAAAAAGATTGCTACATATCAGGAAGGTGTG
ACTCTTAGAAAGAAGGAGGTTGAAGAAGCTAAGCTGGCAATTGCGAAAGAGGAAACTGAA
CTATCCAAGTTGAAAAACGAGAAGAAGATACTTAAAGAGTTGGTTGAGCAGCTTAAGGAG
CGCAAGGAACAAATAGAGAAGGCTGAGGAGGAAGAACGGTTAAAGAGAGAAAAAGAAGAG
AAGGATCAAAAGGAATCTGAAGATGCTAAAGTAGAGACAACTAAATCTGAGGAAAAAACT
GAAGTTCAAGAAGATGCTGTGAAGAACGACGTCCACGATAAGATTGGCCTACTCAACGGC
TCTCCATCTGATGTGGTAGAACGCCCTGACGAAGATATGGACAAAATCGAGCATGATGAC
CAGTCCCACAAGGATGAAATTGAGCAGGTTCCTGAGGATTCTCAGGAGAAAGATACTACT
GAAAATACCGAATCATTGTCAAAAGAAGAGTTAGGTCGTGTTATTGGTTCTCGTTGGCTG
GGAAAAAAAAGTGAGCAGGCAAATGAGGAGGTTGATGCTGGAACTAAGAGCAACTATGAC
AGCAGCGATGAAGGACCGACTGATACTCATGAAGAGGAATACCATGGATATGATTCGGAG
GATGATGAGCACAAGTATGAAGATGACGAAACGGAGGACCCAGTTGAAGATCTTGGGGGA
GAGGACCACGATTCAAGTTCTTCATACAAGGCTGAGTCTGATGATGATTCTGATTTCTCA
GATGTTACGGCCACAAGTAATCCTTCATGGATGGAGAAGATACAGCGAACAATGAAGAGC
ATTTTCCGCTCTGTGAATTTGTTCCAAACTCCAGTGAACATTTCTGATGCTGCCCATATA
CGCAAGGAATATGATGAGTCAAGTGCGAAGTTGTCAAAGGTCCTATCAAGGATATCTAGT
TTGGAGAAAAAGCTCAAACAGGATTTTGGCCCAGAGAAGGAATTCTATTCATTCTATGGT
CAATGCTTCGAGAGCAAACAGAACAAGTACACATACAAGATTTGTCCTTTCAAAGAAGCA
ACCCAGGTCGAGGGCTACAGTACAACTCGTTTGGGGAATTGGGATAAATTCGAGGATTCC
TATAGAACCTTGCAATTCTCAAGCGGGGACAAATGCTGGAATGGGCCAGATAGAAGTTTA
AAGGTCAAATTAAGATGTGGCCTGAAAAATGAGTTGACTGATGTAGATGAGCCCAGCCGC
TGCGAATATATGGCATTTTTGTCTACCCCAGCTCTTTGTATCGAAGAAAAGCTGAAGGAG
CTCCAAGATAAACTAGATATGATGAGCAAAGAACAACCTCAGAGTCATGATGAACTGTGA

Peptide Sequence

PEP ID

XP_016488062.1
PEP Infomation

PREDICTED: glucosidase 2 subunit beta-like [Nicotiana tabacum]
Sequence

MAIKDMYDGAKTRVRTVEGDSEHFPVVMGLEVWRHTLESKGFKLSRTKTKYMECKFSAEP
GQVSVDVRLESHVIPSKDENDLFVIADENYYKGLSSGAIKCKDGSKKFTKDQLNDDFCDC
PDGSDEPGTSACPNGKFYCKNAGHIPLSIYSSRVNDRICDCCDGSDEYDGKTKCPNTCWE
AGKVAREKLNKKIATYQEGVTLRKKEVEEAKLAIAKEETELSKLKNEKKILKELVEQLKE
RKEQIEKAEEEERLKREKEEKDQKESEDAKVETTKSEEKTEVQEDAVKNDVHDKIGLLNG
SPSDVVERPDEDMDKIEHDDQSHKDEIEQVPEDSQEKDTTENTESLSKEELGRVIGSRWL
GKKSEQANEEVDAGTKSNYDSSDEGPTDTHEEEYHGYDSEDDEHKYEDDETEDPVEDLGG
EDHDSSSSYKAESDDDSDFSDVTATSNPSWMEKIQRTMKSIFRSVNLFQTPVNISDAAHI
RKEYDESSAKLSKVLSRISSLEKKLKQDFGPEKEFYSFYGQCFESKQNKYTYKICPFKEA
TQVEGYSTTRLGNWDKFEDSYRTLQFSSGDKCWNGPDRSLKVKLRCGLKNELTDVDEPSR
CEYMAFLSTPALCIEEKLKELQDKLDMMSKEQPQSHDEL

Transcript Sequence

Gene sequence data has not been registered.